Draw Small Molecules

This protocol runs JChemPaint java program and allows the user to draw their own molecules.

Input

Note

All parameters include a help button that gives further information for each of them.

Draw Small Molecules form 1

Draw Small Molecules form 2

If the molecules are saved in the protocol folder and mol (default) format, Scipion will automatically detect the files and generate a SetOfSmallMolecules as output. If the molecules are saved somewhere else, the user will have to import them.

Draw Small Molecules output