UniProt CrossRef

This protocol searches in the UniProt cross reference database for related entries of a set of UniProt IDs for specified databases. The user can choose whether to store the cross reference as a secondary or the main ID and whether to store also additional properties stored in those IDs.

Input

Note

All parameters include a help button that gives further information for each of them.

UniProt CrossRef form

The result of this protocol is a SetOfDatabaseIDs containing the information of the cross references. This can also be checked in a summary file.

Test

This protocol has an integrated test that can be run using the following command:

scipion3 tests pwchem.tests.tests_databases.TestUniProtCrossRef