AutoSite Binding Site prediction

This protocol uses AutoSite tool to predict the binding sites on a protein receptor.

Input

Note

All parameters include a help button that gives further information for each of them.

AutoSite Binding Site prediction form

The results of these protocols are a SetOfStructROIs (Structural Regions Of Interest), containing the predicted binding sites. The user can visualize them using Analyze Results, which will display the General StructROIs viewer.

Test

This protocol has an integrated test that can be run using the following command:

scipion3 tests autodock.tests.test_autodock.TestAutoSite